J4_7PO0_002

3D structure

PDB id

7PO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUUCAC*GACA*UAG*CC

Length

17 nucleotides

Bulged bases

7PO0|1|A|C|722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PO0|1|A|G|717
7PO0|1|A|A|718
7PO0|1|A|G|719
7PO0|1|A|U|720
7PO0|1|A|U|721
7PO0|1|A|C|722
7PO0|1|A|A|723
7PO0|1|A|C|724
*
7PO0|1|A|G|750
7PO0|1|A|A|751
7PO0|1|A|C|752
7PO0|1|A|A|753
*
7PO0|1|A|U|789
7PO0|1|A|A|790
7PO0|1|A|G|791
*
7PO0|1|A|C|797
7PO0|1|A|C|798

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial