3D structure

PDB id
7PO1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Initiation complex of human mitochondrial ribosome small subunit with IF3
Experimental method
ELECTRON MICROSCOPY
Resolution
2.92 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
7PO1|1|A|A|700, 7PO1|1|A|U|711, 7PO1|1|A|C|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PO1|1|A|C|698
7PO1|1|A|A|699
7PO1|1|A|A|700
7PO1|1|A|G|701
*
7PO1|1|A|C|708
7PO1|1|A|G|709
7PO1|1|A|U|710
7PO1|1|A|U|711
7PO1|1|A|C|712
7PO1|1|A|C|713
7PO1|1|A|A|714
7PO1|1|A|G|715
*
7PO1|1|A|C|800
7PO1|1|A|A|801
7PO1|1|A|C|802
*
7PO1|1|A|G|811
7PO1|1|A|A|812
7PO1|1|A|A|813
7PO1|1|A|A|814
7PO1|1|A|C|815
7PO1|1|A|A|816
7PO1|1|A|G|817

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial

Coloring options:

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