J4_7PO4_001

3D structure

PDB id

7PO4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

7PO4|1|A|U|2316, 7PO4|1|A|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PO4|1|A|C|2314
7PO4|1|A|A|2315
7PO4|1|A|U|2316
7PO4|1|A|G|2317
*
7PO4|1|A|C|2326
7PO4|1|A|U|2327
*
7PO4|1|A|A|2450
7PO4|1|A|A|2451
7PO4|1|A|A|2452
7PO4|1|A|G|2453
*
7PO4|1|A|C|2671
7PO4|1|A|A|2672
7PO4|1|A|G|2673

Current chains

Chain A

16SrRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial