J4_7PO4_003
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- GU(1MA)(2MG)*CAC*GAGAUUU*ACC
- Length
- 17 nucleotides
- Bulged bases
- 7PO4|1|B|U|8, 7PO4|1|B|U|48
- QA status
- Modified nucleotides: 1MA, 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PO4|1|B|G|7
7PO4|1|B|U|8
7PO4|1|B|1MA|9
7PO4|1|B|2MG|10
*
7PO4|1|B|C|25
7PO4|1|B|A|26
7PO4|1|B|C|27
*
7PO4|1|B|G|43
7PO4|1|B|A|44
7PO4|1|B|G|45
7PO4|1|B|A|46
7PO4|1|B|U|48
7PO4|1|B|U|49
7PO4|1|B|U|50
*
7PO4|1|B|A|64
7PO4|1|B|C|65
7PO4|1|B|C|66
Current chains
- Chain B
- tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
Coloring options: