J4_7PWG_001

3D structure

PDB id

7PWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CC*GAGUAG*CGAAG*CAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWG|1|1|C|109
7PWG|1|1|C|110
*
7PWG|1|1|G|220
7PWG|1|1|A|221
7PWG|1|1|G|222
7PWG|1|1|U|223
7PWG|1|1|A|224
7PWG|1|1|G|225
*
7PWG|1|1|C|246
7PWG|1|1|G|247
7PWG|1|1|A|248
7PWG|1|1|A|249
7PWG|1|1|G|250
*
7PWG|1|1|C|267
7PWG|1|1|A|268
7PWG|1|1|A|269
7PWG|1|1|G|270

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain L

60S ribosomal protein L13

Chain N

Ribosomal protein L15

Chain h

Ribosomal protein L29

Chain i

Ribosomal protein L36-1