J4_7PWG_002

3D structure

PDB id

7PWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CGCGAGG*CGCC*GAG*CGUACG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWG|1|1|C|150
7PWG|1|1|G|151
7PWG|1|1|C|152
7PWG|1|1|G|153
7PWG|1|1|A|154
7PWG|1|1|G|155
7PWG|1|1|G|156
*
7PWG|1|1|C|171
7PWG|1|1|G|172
7PWG|1|1|C|173
7PWG|1|1|C|174
*
7PWG|1|1|G|178
7PWG|1|1|A|179
7PWG|1|1|G|180
*
7PWG|1|1|C|192
7PWG|1|1|G|193
7PWG|1|1|U|194
7PWG|1|1|A|195
7PWG|1|1|C|196
7PWG|1|1|G|197

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain 4

rRNA 5.8S

Chain C

Ribosomal protein L4

Chain Y

Ribosomal protein L26