J4_7Q0R_008
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CUAAG*UUGAU*ACC*GUG
- Length
- 16 nucleotides
- Bulged bases
- 7Q0R|1|1|A|2629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7Q0R_008 not in the Motif Atlas
- Homologous match to J4_8C3A_008
- Geometric discrepancy: 0.0561
- The information below is about J4_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q0R|1|1|C|2626
7Q0R|1|1|U|2627
7Q0R|1|1|A|2628
7Q0R|1|1|A|2629
7Q0R|1|1|G|2630
*
7Q0R|1|1|U|2684
7Q0R|1|1|U|2685
7Q0R|1|1|G|2686
7Q0R|1|1|A|2687
7Q0R|1|1|U|2688
*
7Q0R|1|1|A|2712
7Q0R|1|1|C|2713
7Q0R|1|1|C|2714
*
7Q0R|1|1|G|2723
7Q0R|1|1|U|2724
7Q0R|1|1|G|2725
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain AC
- 60S ribosomal protein L29
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain m
- Ribosomal 60S subunit protein L5
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