J4_7QI4_007

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAGUUCAC*GACA*UAG*CC

Length

17 nucleotides

Bulged bases

7QI4|1|AA|C|722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QI4|1|AA|G|717
7QI4|1|AA|A|718
7QI4|1|AA|G|719
7QI4|1|AA|U|720
7QI4|1|AA|U|721
7QI4|1|AA|C|722
7QI4|1|AA|A|723
7QI4|1|AA|C|724
*
7QI4|1|AA|G|750
7QI4|1|AA|A|751
7QI4|1|AA|C|752
7QI4|1|AA|A|753
*
7QI4|1|AA|U|789
7QI4|1|AA|A|790
7QI4|1|AA|G|791
*
7QI4|1|AA|C|797
7QI4|1|AA|C|798

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial