J4_7RYF_003
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGUUUAG
- Length
- 20 nucleotides
- Bulged bases
- 7RYF|1|A|U|651, 7RYF|1|A|U|652
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7RYF_003 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.4225
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7RYF|1|A|C|599
7RYF|1|A|G|600
7RYF|1|A|A|601
7RYF|1|A|G|602
*
7RYF|1|A|C|622
7RYF|1|A|G|623
7RYF|1|A|U|624
7RYF|1|A|A|625
7RYF|1|A|G|626
*
7RYF|1|A|C|633
7RYF|1|A|G|634
7RYF|1|A|A|635
7RYF|1|A|G|636
*
7RYF|1|A|C|648
7RYF|1|A|G|649
7RYF|1|A|U|650
7RYF|1|A|U|651
7RYF|1|A|U|652
7RYF|1|A|A|653
7RYF|1|A|G|654
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L15
Coloring options: