J4_7SFR_010

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

7SFR|1|a|C|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SFR|1|a|G|110
7SFR|1|a|A|111
7SFR|1|a|G|112
7SFR|1|a|U|113
7SFR|1|a|A|114
7SFR|1|a|A|115
7SFR|1|a|C|116
7SFR|1|a|A|117
7SFR|1|a|C|118
*
7SFR|1|a|G|237
7SFR|1|a|G|238
7SFR|1|a|C|239
*
7SFR|1|a|G|285
7SFR|1|a|U|286
7SFR|1|a|A|287
7SFR|1|a|G|288
*
7SFR|1|a|C|310
7SFR|1|a|C|311

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17