J4_7SFR_011

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUU*GAUAGGAC*GUGGAAAG*CGG

Length

22 nucleotides

Bulged bases

7SFR|1|a|A|208

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SFR|1|a|C|138
7SFR|1|a|U|139
7SFR|1|a|U|140
*
7SFR|1|a|G|174
7SFR|1|a|A|175
7SFR|1|a|U|176
7SFR|1|a|A|177
7SFR|1|a|G|178
7SFR|1|a|G|179
7SFR|1|a|A|180
7SFR|1|a|C|181
*
7SFR|1|a|G|202
7SFR|1|a|U|203
7SFR|1|a|G|204
7SFR|1|a|G|205
7SFR|1|a|A|206
7SFR|1|a|A|207
7SFR|1|a|A|208
7SFR|1|a|G|209
*
7SFR|1|a|C|218
7SFR|1|a|G|219
7SFR|1|a|G|220

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20