J4_7SSL_012

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAGA*UUGCC

Length

23 nucleotides

Bulged bases

7SSL|1|3|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|3|G|141
7SSL|1|3|G|142
7SSL|1|3|A|143
7SSL|1|3|G|144
*
7SSL|1|3|C|178
7SSL|1|3|A|179
7SSL|1|3|U|180
7SSL|1|3|A|181
7SSL|1|3|A|182
7SSL|1|3|C|183
7SSL|1|3|G|184
*
7SSL|1|3|C|193
7SSL|1|3|C|194
7SSL|1|3|A|195
7SSL|1|3|A|196
7SSL|1|3|A|197
7SSL|1|3|G|198
7SSL|1|3|A|199
*
7SSL|1|3|U|218
7SSL|1|3|U|219
7SSL|1|3|G|220
7SSL|1|3|C|221
7SSL|1|3|C|222

Current chains

Chain 3

16S rRNA

Nearby chains

Chain Y

30S ribosomal protein S20