J4_7SSL_015
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGG*CGUCGG*CCGAAGGUCG*CC
- Length
- 22 nucleotides
- Bulged bases
- 7SSL|1|6|U|8, 7SSL|1|6|U|47, 7SSL|1|6|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SSL|1|6|G|7
7SSL|1|6|U|8
7SSL|1|6|G|9
7SSL|1|6|G|10
*
7SSL|1|6|C|25
7SSL|1|6|G|26
7SSL|1|6|U|27
7SSL|1|6|C|28
7SSL|1|6|G|29
7SSL|1|6|G|30
*
7SSL|1|6|C|40
7SSL|1|6|C|41
7SSL|1|6|G|42
7SSL|1|6|A|43
7SSL|1|6|A|44
7SSL|1|6|G|45
7SSL|1|6|G|46
7SSL|1|6|U|47
7SSL|1|6|C|48
7SSL|1|6|G|49
*
7SSL|1|6|C|65
7SSL|1|6|C|66
Current chains
- Chain 6
- tRNA fMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- 50S ribosomal protein L33
- Chain R
- 30S ribosomal protein S13
Coloring options: