3D structure

PDB id
7SSL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UGGA*UACAAUG*CGUAGUCC*GUCGGAA
Length
26 nucleotides
Bulged bases
7SSL|1|3|U|1240, 7SSL|1|3|C|1302
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSL|1|3|U|943
7SSL|1|3|G|944
7SSL|1|3|G|945
7SSL|1|3|A|946
*
7SSL|1|3|U|1235
7SSL|1|3|A|1236
7SSL|1|3|C|1237
7SSL|1|3|A|1238
7SSL|1|3|A|1239
7SSL|1|3|U|1240
7SSL|1|3|G|1241
*
7SSL|1|3|C|1296
7SSL|1|3|G|1297
7SSL|1|3|U|1298
7SSL|1|3|A|1299
7SSL|1|3|G|1300
7SSL|1|3|U|1301
7SSL|1|3|C|1302
7SSL|1|3|C|1303
*
7SSL|1|3|G|1334
7SSL|1|3|U|1335
7SSL|1|3|C|1336
7SSL|1|3|G|1337
7SSL|1|3|G|1338
7SSL|1|3|A|1339
7SSL|1|3|A|1340

Current chains

Chain 3
16S rRNA

Nearby chains

Chain 6
Transfer RNA; tRNA
Chain L
30S ribosomal protein S7
Chain N
30S ribosomal protein S9
Chain R
30S ribosomal protein S13

Coloring options:

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