J4_7SSO_012

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CAUAACG*CCAAAGA*UUGC

Length

21 nucleotides

Bulged bases

7SSO|1|3|C|183, 7SSO|1|3|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSO|1|3|G|142
7SSO|1|3|A|143
7SSO|1|3|G|144
*
7SSO|1|3|C|178
7SSO|1|3|A|179
7SSO|1|3|U|180
7SSO|1|3|A|181
7SSO|1|3|A|182
7SSO|1|3|C|183
7SSO|1|3|G|184
*
7SSO|1|3|C|193
7SSO|1|3|C|194
7SSO|1|3|A|195
7SSO|1|3|A|196
7SSO|1|3|A|197
7SSO|1|3|G|198
7SSO|1|3|A|199
*
7SSO|1|3|U|218
7SSO|1|3|U|219
7SSO|1|3|G|220
7SSO|1|3|C|221

Current chains

Chain 3

16S rRNA

Nearby chains

Chain Y

30S ribosomal protein S20