J4_7SSW_013
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAAAGCG*CGAAAG*CCGUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 7SSW|1|3|C|576, 7SSW|1|3|A|815, 7SSW|1|3|C|817, 7SSW|1|3|G|818, 7SSW|1|3|A|819, 7SSW|1|3|U|820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SSW|1|3|C|569
7SSW|1|3|G|570
7SSW|1|3|U|571
7SSW|1|3|A|572
7SSW|1|3|A|573
7SSW|1|3|A|574
7SSW|1|3|G|575
7SSW|1|3|C|576
7SSW|1|3|G|577
*
7SSW|1|3|C|764
7SSW|1|3|G|765
7SSW|1|3|A|766
7SSW|1|3|A|767
7SSW|1|3|A|768
7SSW|1|3|G|769
*
7SSW|1|3|C|810
7SSW|1|3|C|811
7SSW|1|3|G|812
7SSW|1|3|U|813
7SSW|1|3|A|814
7SSW|1|3|A|815
7SSW|1|3|A|816
7SSW|1|3|C|817
7SSW|1|3|G|818
7SSW|1|3|A|819
7SSW|1|3|U|820
7SSW|1|3|G|821
*
7SSW|1|3|C|879
7SSW|1|3|C|880
7SSW|1|3|G|881
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
- Chain V
- 30S ribosomal protein S17
- Chain Z
- 30S ribosomal protein S21
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