J4_7ST6_015
3D structure
- PDB id
- 7ST6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation, non-rotated 70S ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGG*CGUC*GAAGGUCGUCGG*CCGGCC
- Length
- 26 nucleotides
- Bulged bases
- 7ST6|1|7|U|8, 7ST6|1|7|U|47, 7ST6|1|7|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ST6|1|7|G|7
7ST6|1|7|U|8
7ST6|1|7|G|9
7ST6|1|7|G|10
*
7ST6|1|7|C|25
7ST6|1|7|G|26
7ST6|1|7|U|27
7ST6|1|7|C|28
*
7ST6|1|7|G|42
7ST6|1|7|A|43
7ST6|1|7|A|44
7ST6|1|7|G|45
7ST6|1|7|G|46
7ST6|1|7|U|47
7ST6|1|7|C|48
7ST6|1|7|G|49
7ST6|1|7|U|50
7ST6|1|7|C|51
7ST6|1|7|G|52
7ST6|1|7|G|53
*
7ST6|1|7|C|61
7ST6|1|7|C|62
7ST6|1|7|G|63
7ST6|1|7|G|64
7ST6|1|7|C|65
7ST6|1|7|C|66
Current chains
- Chain 7
- tRNA fMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 6
- Transfer RNA; tRNA
- Chain C
- 50S ribosomal protein L33
- Chain L
- 30S ribosomal protein S7
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