J4_7ST7_012
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAGGG*CGCAUAACG*CCAAAG*UGC
- Length
- 23 nucleotides
- Bulged bases
- 7ST7|1|3|C|183, 7ST7|1|3|A|197
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ST7|1|3|G|142
7ST7|1|3|A|143
7ST7|1|3|G|144
7ST7|1|3|G|145
7ST7|1|3|G|146
*
7ST7|1|3|C|176
7ST7|1|3|G|177
7ST7|1|3|C|178
7ST7|1|3|A|179
7ST7|1|3|U|180
7ST7|1|3|A|181
7ST7|1|3|A|182
7ST7|1|3|C|183
7ST7|1|3|G|184
*
7ST7|1|3|C|193
7ST7|1|3|C|194
7ST7|1|3|A|195
7ST7|1|3|A|196
7ST7|1|3|A|197
7ST7|1|3|G|198
*
7ST7|1|3|U|219
7ST7|1|3|G|220
7ST7|1|3|C|221
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain Y
- 30S ribosomal protein S20
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