J4_7TOR_008

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

7TOR|1|A28S|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|G|2618
7TOR|1|A28S|G|2619
*
7TOR|1|A28S|U|2637
7TOR|1|A28S|G|2638
7TOR|1|A28S|U|2639
7TOR|1|A28S|G|2640
7TOR|1|A28S|A|2641
7TOR|1|A28S|A|2642
*
7TOR|1|A28S|U|2692
7TOR|1|A28S|G|2693
7TOR|1|A28S|G|2694
7TOR|1|A28S|A|2695
7TOR|1|A28S|A|2696
7TOR|1|A28S|A|2697
7TOR|1|A28S|G|2698
*
7TOR|1|A28S|U|2718
7TOR|1|A28S|C|2719

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19

Chain AL22

eL22

Chain AL34

60S ribosomal protein L34

Chain AL38

eL38