J4_7TOR_011

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

7TOR|1|A28S|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|C|4231
7TOR|1|A28S|U|4232
7TOR|1|A28S|A|4233
7TOR|1|A28S|A|4234
7TOR|1|A28S|G|4235
*
7TOR|1|A28S|U|4289
7TOR|1|A28S|U|4290
7TOR|1|A28S|G|4291
*
7TOR|1|A28S|C|4318
7TOR|1|A28S|C|4319
*
7TOR|1|A28S|G|4328
7TOR|1|A28S|G|4329
7TOR|1|A28S|G|4330

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL05

60S ribosomal protein L5

Chain AL21

60S ribosomal protein L21

Chain AL42

eL42