J4_7TTU_009

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7TTU|1|1|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TTU|1|1|G|1347
7TTU|1|1|U|1348
7TTU|1|1|U|1349
7TTU|1|1|U|1350
7TTU|1|1|C|1351
*
7TTU|1|1|G|1375
7TTU|1|1|G|1376
7TTU|1|1|U|1377
7TTU|1|1|U|1378
7TTU|1|1|A|1379
7TTU|1|1|G|1380
*
7TTU|1|1|C|1441
7TTU|1|1|C|1442
*
7TTU|1|1|G|1641
7TTU|1|1|C|1642
7TTU|1|1|C|1643
7TTU|1|1|C|1644
7TTU|1|1|G|1645
7TTU|1|1|U|1646
7TTU|1|1|A|1647
7TTU|1|1|C|1648

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L23

Chain P

50S ribosomal protein L34