J4_7TUT_006

3D structure

PDB id

7TUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

7TUT|1|K|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TUT|1|K|G|2618
7TUT|1|K|G|2619
*
7TUT|1|K|U|2637
7TUT|1|K|G|2638
7TUT|1|K|U|2639
7TUT|1|K|G|2640
7TUT|1|K|A|2641
7TUT|1|K|A|2642
*
7TUT|1|K|U|2692
7TUT|1|K|G|2693
7TUT|1|K|G|2694
7TUT|1|K|A|2695
7TUT|1|K|A|2696
7TUT|1|K|A|2697
7TUT|1|K|G|2698
*
7TUT|1|K|U|2718
7TUT|1|K|C|2719

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein L19

Chain U

eL22

Chain g

60S ribosomal protein L34

Chain k

60S ribosomal protein L38