3D structure

PDB id
7U0H (explore in PDB, NAKB, or RNA 3D Hub)
Description
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
GACUG*CAUAG*UGAUUU*AUUAAC
Length
22 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7U0H|1|1|G|2130
7U0H|1|1|A|2131
7U0H|1|1|C|2132
7U0H|1|1|U|2133
7U0H|1|1|G|2134
*
7U0H|1|1|C|2146
7U0H|1|1|A|2147
7U0H|1|1|U|2148
7U0H|1|1|A|2149
7U0H|1|1|G|2150
*
7U0H|1|1|U|2186
7U0H|1|1|G|2187
7U0H|1|1|A|2188
7U0H|1|1|U|2189
7U0H|1|1|U|2190
7U0H|1|1|U|2191
*
7U0H|1|1|A|2317
7U0H|1|1|U|2318
7U0H|1|1|U|2319
7U0H|1|1|A|2320
7U0H|1|1|A|2321
7U0H|1|1|C|2322

Current chains

Chain 1
25S rRNA

Nearby chains

Chain A
60S ribosomal protein L2-A
Chain p
60S ribosomal protein L43-A
Chain w
27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1238 s