J4_7U2I_014
3D structure
- PDB id
- 7U2I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- G(4SU)AG*CGA*UAUACGAG*CUUC
- Length
- 19 nucleotides
- Bulged bases
- 7U2I|1|1w|4SU|8, 7U2I|1|1w|C|48
- QA status
- Modified nucleotides: 4SU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_47701.1
- Basepair signature
- cWW-F-F-cWW-F-cWW-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7U2I|1|1w|G|7
7U2I|1|1w|4SU|8
7U2I|1|1w|A|9
7U2I|1|1w|G|10
*
7U2I|1|1w|C|25
7U2I|1|1w|G|26
7U2I|1|1w|A|27
*
7U2I|1|1w|U|43
7U2I|1|1w|A|44
7U2I|1|1w|U|45
7U2I|1|1w|A|46
7U2I|1|1w|C|48
7U2I|1|1w|G|49
7U2I|1|1w|A|50
7U2I|1|1w|G|51
*
7U2I|1|1w|C|63
7U2I|1|1w|U|64
7U2I|1|1w|U|65
7U2I|1|1w|C|66
Current chains
- Chain 1w
- A-site Aminoacyl-tRNA Gly-NH-tRNAgly
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1Q
- 50S ribosomal protein L16
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