J4_7UCJ_003
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CC*GAGGGAG*UGCCGCCG*CACGGGG
- Length
- 24 nucleotides
- Bulged bases
- 7UCJ|1|5|G|959, 7UCJ|1|5|C|972, 7UCJ|1|5|C|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCJ|1|5|C|712
7UCJ|1|5|C|713
*
7UCJ|1|5|G|955
7UCJ|1|5|A|956
7UCJ|1|5|G|957
7UCJ|1|5|G|958
7UCJ|1|5|G|959
7UCJ|1|5|A|960
7UCJ|1|5|G|961
*
7UCJ|1|5|U|971
7UCJ|1|5|G|971|||A
7UCJ|1|5|C|972
7UCJ|1|5|C|973
7UCJ|1|5|G|974
7UCJ|1|5|C|975
7UCJ|1|5|C|976
7UCJ|1|5|G|977
*
7UCJ|1|5|C|1278
7UCJ|1|5|A|1279
7UCJ|1|5|C|1280
7UCJ|1|5|G|1281
7UCJ|1|5|G|1282
7UCJ|1|5|G|1283
7UCJ|1|5|G|1284
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- 60S ribosomal protein L7
- Chain e
- 60S ribosomal protein L32
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