J4_7UG7_006
3D structure
- PDB id
- 7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UG7_006 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.2058
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7UG7|1|23|C|601
7UG7|1|23|A|602
7UG7|1|23|A|603
7UG7|1|23|G|604
*
7UG7|1|23|C|624
7UG7|1|23|G|625
7UG7|1|23|A|626
7UG7|1|23|A|627
7UG7|1|23|G|628
*
7UG7|1|23|C|635
7UG7|1|23|G|636
7UG7|1|23|A|637
7UG7|1|23|G|638
*
7UG7|1|23|C|650
7UG7|1|23|G|651
7UG7|1|23|U|652
7UG7|1|23|U|653
7UG7|1|23|A|654
7UG7|1|23|A|655
7UG7|1|23|G|656
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain LD
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
- Chain Li
- 50S ribosomal protein L35
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