J4_7UW1_002
3D structure
- PDB id
- 7UW1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii 70S ribosome-Streptothricin-D complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGAAC*GAAC*GAG*CGUAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UW1_002 not in the Motif Atlas
- Homologous match to J4_5J7L_019
- Geometric discrepancy: 0.0676
- The information below is about J4_5J7L_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UW1|1|A|G|299
7UW1|1|A|G|300
7UW1|1|A|A|301
7UW1|1|A|A|302
7UW1|1|A|C|303
*
7UW1|1|A|G|318
7UW1|1|A|A|319
7UW1|1|A|A|320
7UW1|1|A|C|321
*
7UW1|1|A|G|325
7UW1|1|A|A|326
7UW1|1|A|G|327
*
7UW1|1|A|C|339
7UW1|1|A|G|340
7UW1|1|A|U|341
7UW1|1|A|A|342
7UW1|1|A|C|343
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L24
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