3D structure

PDB id
7Y7G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.34 Å

Loop

Sequence
CU(2MG)*CG*CCUAAGGUAG*CGAAUG
Length
21 nucleotides
Bulged bases
7Y7G|1|a|U|1971
QA status
Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_7Y7G_014 not in the Motif Atlas
Homologous match to J4_9DFE_008
Geometric discrepancy: 0.0993
The information below is about J4_9DFE_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_93343.1
Basepair signature
cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F
Number of instances in this motif group
4

Unit IDs

7Y7G|1|a|C|1833
7Y7G|1|a|U|1834
7Y7G|1|a|2MG|1835
*
7Y7G|1|a|C|1905
7Y7G|1|a|G|1906
*
7Y7G|1|a|C|1924
7Y7G|1|a|C|1925
7Y7G|1|a|U|1926
7Y7G|1|a|A|1927
7Y7G|1|a|A|1928
7Y7G|1|a|G|1929
7Y7G|1|a|G|1930
7Y7G|1|a|U|1931
7Y7G|1|a|A|1932
7Y7G|1|a|G|1933
*
7Y7G|1|a|C|1967
7Y7G|1|a|G|1968
7Y7G|1|a|A|1969
7Y7G|1|a|A|1970
7Y7G|1|a|U|1971
7Y7G|1|a|G|1972

Current chains

Chain a
23S rRNA

Nearby chains

Chain A
Small subunit ribosomal RNA; SSU rRNA
Chain Z
Transfer RNA; tRNA
Chain c
50S ribosomal protein L2

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3185 s