J4_7ZAH_001

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAGUAACAC*GGC*GUAC*GG

Length

18 nucleotides

Bulged bases

7ZAH|1|2|C|117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|C|111
7ZAH|1|2|A|112
7ZAH|1|2|G|113
7ZAH|1|2|U|114
7ZAH|1|2|A|115
7ZAH|1|2|A|116
7ZAH|1|2|C|117
7ZAH|1|2|A|118
7ZAH|1|2|C|119
*
7ZAH|1|2|G|247
7ZAH|1|2|G|248
7ZAH|1|2|C|249
*
7ZAH|1|2|G|295
7ZAH|1|2|U|296
7ZAH|1|2|A|297
7ZAH|1|2|C|298
*
7ZAH|1|2|G|320
7ZAH|1|2|G|321

Current chains

Chain 2

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S4e

Chain J

30S ribosomal protein S8e

Chain N

30S ribosomal protein S12

Chain R

30S ribosomal protein S17