J4_7ZAH_002

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAG*CAUAG*CGAAAGG*CGC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|G|139
7ZAH|1|2|A|140
7ZAH|1|2|G|141
*
7ZAH|1|2|C|175
7ZAH|1|2|A|176
7ZAH|1|2|U|177
7ZAH|1|2|A|178
7ZAH|1|2|G|179
*
7ZAH|1|2|C|207
7ZAH|1|2|G|208
7ZAH|1|2|A|209
7ZAH|1|2|A|210
7ZAH|1|2|A|211
7ZAH|1|2|G|212
7ZAH|1|2|G|213
*
7ZAH|1|2|C|228
7ZAH|1|2|G|229
7ZAH|1|2|C|230

Current chains

Chain 2

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S4e

Chain J

30S ribosomal protein S8e