J4_7ZAI_003
3D structure
- PDB id
- 7ZAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCG*(4AC)GAAG*UGUAAAGGA(OMU)G*C(4AC)
- Length
- 21 nucleotides
- Bulged bases
- 7ZAI|1|2|C|542, 7ZAI|1|2|A|782
- QA status
- Modified nucleotides: 4AC, OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZAI|1|2|G|541
7ZAI|1|2|C|542
7ZAI|1|2|G|543
*
7ZAI|1|2|4AC|731
7ZAI|1|2|G|732
7ZAI|1|2|A|733
7ZAI|1|2|A|734
7ZAI|1|2|G|735
*
7ZAI|1|2|U|778
7ZAI|1|2|G|779
7ZAI|1|2|U|780
7ZAI|1|2|A|781
7ZAI|1|2|A|782
7ZAI|1|2|A|783
7ZAI|1|2|G|784
7ZAI|1|2|G|785
7ZAI|1|2|A|786
7ZAI|1|2|OMU|787
7ZAI|1|2|G|788
*
7ZAI|1|2|C|850
7ZAI|1|2|4AC|851
Current chains
- Chain 2
- 16S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L41e
- Chain I
- 30S ribosomal protein S8
- Chain M
- 30S ribosomal protein S11
- Chain N
- 30S ribosomal protein S12
- Chain Q
- 30S ribosomal protein S15
- Chain R
- 30S ribosomal protein S17
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