J4_7ZJX_008
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUGG*CGUUC*GAAGGG*CAGCCGA(PSU)
- Length
- 25 nucleotides
- Bulged bases
- 7ZJX|1|L5|A|2315, 7ZJX|1|L5|G|2318
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJX|1|L5|A|2294
7ZJX|1|L5|G|2295
7ZJX|1|L5|A|2296
7ZJX|1|L5|U|2297
7ZJX|1|L5|G|2298
7ZJX|1|L5|G|2299
*
7ZJX|1|L5|C|2308
7ZJX|1|L5|G|2309
7ZJX|1|L5|U|2310
7ZJX|1|L5|U|2311
7ZJX|1|L5|C|2312
*
7ZJX|1|L5|G|2314
7ZJX|1|L5|A|2315
7ZJX|1|L5|A|2316
7ZJX|1|L5|G|2317
7ZJX|1|L5|G|2318
7ZJX|1|L5|G|2319
*
7ZJX|1|L5|C|2344
7ZJX|1|L5|A|2345
7ZJX|1|L5|G|2346
7ZJX|1|L5|C|2347
7ZJX|1|L5|C|2348
7ZJX|1|L5|G|2349
7ZJX|1|L5|A|2350
7ZJX|1|L5|PSU|2351
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LD
- 60S ribosomal protein uL2
- Chain LJ
- 60S ribosomal protein eL8
- Chain LQ
- Ribosomal protein L15
- Chain La
- Ribosomal_L23eN domain-containing protein
- Chain Lm
- Ribosomal protein L37
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