J4_7ZJX_009

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

7ZJX|1|L5|A|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|G|2461
7ZJX|1|L5|G|2462
*
7ZJX|1|L5|U|2480
7ZJX|1|L5|G|2481
7ZJX|1|L5|U|2482
7ZJX|1|L5|G|2483
7ZJX|1|L5|A|2484
7ZJX|1|L5|A|2485
*
7ZJX|1|L5|U|2535
7ZJX|1|L5|G|2536
7ZJX|1|L5|G|2537
7ZJX|1|L5|A|2538
7ZJX|1|L5|A|2539
7ZJX|1|L5|A|2540
7ZJX|1|L5|G|2541
*
7ZJX|1|L5|U|2561
7ZJX|1|L5|C|2562

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L19

Chain LX

60S ribosomal protein eL22

Chain Lj

60S ribosomal protein L34

Chain Ln

60S ribosomal protein L38