J4_7ZRS_010
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CUAAG*UUGAU*ACC*GUG
- Length
- 16 nucleotides
- Bulged bases
- 7ZRS|1|5|A|2658
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZRS_010 not in the Motif Atlas
- Homologous match to J4_8C3A_008
- Geometric discrepancy: 0.082
- The information below is about J4_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZRS|1|5|C|2655
7ZRS|1|5|U|2656
7ZRS|1|5|A|2657
7ZRS|1|5|A|2658
7ZRS|1|5|G|2659
*
7ZRS|1|5|U|2713
7ZRS|1|5|U|2714
7ZRS|1|5|G|2715
7ZRS|1|5|A|2716
7ZRS|1|5|U|2717
*
7ZRS|1|5|A|2741
7ZRS|1|5|C|2742
7ZRS|1|5|C|2743
*
7ZRS|1|5|G|2752
7ZRS|1|5|U|2753
7ZRS|1|5|G|2754
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BD
- RPL5 isoform 1
- Chain BS
- 60S ribosomal protein L21-A
- Chain Ba
- 60S ribosomal protein L29
- Chain Bn
- 60S ribosomal protein L42-A
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