J4_7ZUX_005
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CAAAUAU*AG*UGAU*AG
- Length
- 15 nucleotides
- Bulged bases
- 7ZUX|1|5|A|1453, 7ZUX|1|5|U|1456, 7ZUX|1|5|A|1457
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUX_005 not in the Motif Atlas
- Homologous match to J4_8P9A_014
- Geometric discrepancy: 0.0777
- The information below is about J4_8P9A_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_87855.1
- Basepair signature
- cWW-F-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZUX|1|5|C|1452
7ZUX|1|5|A|1453
7ZUX|1|5|A|1454
7ZUX|1|5|A|1455
7ZUX|1|5|U|1456
7ZUX|1|5|A|1457
7ZUX|1|5|U|1458
*
7ZUX|1|5|A|1476
7ZUX|1|5|G|1477
*
7ZUX|1|5|U|1878
7ZUX|1|5|G|1879
7ZUX|1|5|A|1880
7ZUX|1|5|U|1881
*
7ZUX|1|5|A|2353
7ZUX|1|5|G|2354
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain EO
- 60S ribosomal protein L17-A
- Chain EQ
- 60S ribosomal protein L19-A
- Chain Ec
- 60S ribosomal protein L31-A
Coloring options: