J4_7ZUX_013
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GUGG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 7ZUX|1|7|U|48, 7ZUX|1|7|C|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUX_013 not in the Motif Atlas
- Homologous match to J4_6UFG_001
- Geometric discrepancy: 0.2281
- The information below is about J4_6UFG_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.29
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 54
Unit IDs
7ZUX|1|7|G|7
7ZUX|1|7|U|8
7ZUX|1|7|G|9
7ZUX|1|7|G|10
*
7ZUX|1|7|C|26
7ZUX|1|7|G|27
7ZUX|1|7|U|28
*
7ZUX|1|7|A|44
7ZUX|1|7|A|45
7ZUX|1|7|G|46
7ZUX|1|7|G|47
7ZUX|1|7|U|48
7ZUX|1|7|C|49
7ZUX|1|7|G|50
*
7ZUX|1|7|C|66
7ZUX|1|7|C|67
Current chains
- Chain 7
- P/E tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain DZ
- 40S ribosomal protein S25-A
- Chain En
- 60S ribosomal protein L42-A
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