J4_8ANY_006

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CAAG*CGUUCCAG*CAC*GAAACAG

Length

22 nucleotides

Bulged bases

8ANY|1|AA|A|700, 8ANY|1|AA|U|711, 8ANY|1|AA|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ANY|1|AA|C|698
8ANY|1|AA|A|699
8ANY|1|AA|A|700
8ANY|1|AA|G|701
*
8ANY|1|AA|C|708
8ANY|1|AA|G|709
8ANY|1|AA|U|710
8ANY|1|AA|U|711
8ANY|1|AA|C|712
8ANY|1|AA|C|713
8ANY|1|AA|A|714
8ANY|1|AA|G|715
*
8ANY|1|AA|C|800
8ANY|1|AA|A|801
8ANY|1|AA|C|802
*
8ANY|1|AA|G|811
8ANY|1|AA|A|812
8ANY|1|AA|A|813
8ANY|1|AA|A|814
8ANY|1|AA|C|815
8ANY|1|AA|A|816
8ANY|1|AA|G|817

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AU

28S ribosomal protein S26, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial