J4_8BF7_010

3D structure

PDB id

8BF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGAAG*UUGAC*GGUG*CAGG

Length

18 nucleotides

Bulged bases

8BF7|1|0|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BF7|1|0|C|2285
8BF7|1|0|G|2286
8BF7|1|0|A|2287
8BF7|1|0|A|2288
8BF7|1|0|G|2289
*
8BF7|1|0|U|2343
8BF7|1|0|U|2344
8BF7|1|0|G|2345
8BF7|1|0|A|2346
8BF7|1|0|C|2347
*
8BF7|1|0|G|2370
8BF7|1|0|G|2371
8BF7|1|0|U|2372
8BF7|1|0|G|2373
*
8BF7|1|0|C|2380
8BF7|1|0|A|2381
8BF7|1|0|G|2382
8BF7|1|0|G|2383

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain L

50S ribosomal protein L18

Chain T

50S ribosomal protein L27

Chain b

50S ribosomal protein L33

Chain d

50S ribosomal protein L35