J4_8BGH_010

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CGAAG*UUGAC*GGUG*CAGG

Length

18 nucleotides

Bulged bases

8BGH|1|0|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|0|C|2285
8BGH|1|0|G|2286
8BGH|1|0|A|2287
8BGH|1|0|A|2288
8BGH|1|0|G|2289
*
8BGH|1|0|U|2343
8BGH|1|0|U|2344
8BGH|1|0|G|2345
8BGH|1|0|A|2346
8BGH|1|0|C|2347
*
8BGH|1|0|G|2370
8BGH|1|0|G|2371
8BGH|1|0|U|2372
8BGH|1|0|G|2373
*
8BGH|1|0|C|2380
8BGH|1|0|A|2381
8BGH|1|0|G|2382
8BGH|1|0|G|2383

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain L

50S ribosomal protein L18

Chain T

50S ribosomal protein L27

Chain b

50S ribosomal protein L33

Chain d

50S ribosomal protein L35