J4_8BHJ_006

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

UC*GGUGAG*CUU*AAAUCGUA

Length

19 nucleotides

Bulged bases

8BHJ|1|0|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|U|1313
8BHJ|1|0|C|1314
*
8BHJ|1|0|G|1338
8BHJ|1|0|G|1339
8BHJ|1|0|U|1340
8BHJ|1|0|G|1341
8BHJ|1|0|A|1342
8BHJ|1|0|G|1343
*
8BHJ|1|0|C|1404
8BHJ|1|0|U|1405
8BHJ|1|0|U|1406
*
8BHJ|1|0|A|1596
8BHJ|1|0|A|1597
8BHJ|1|0|A|1598
8BHJ|1|0|U|1599
8BHJ|1|0|C|1600
8BHJ|1|0|G|1601
8BHJ|1|0|U|1602
8BHJ|1|0|A|1603

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain Q

50S ribosomal protein L23