J4_8BHL_005
3D structure
- PDB id
- 8BHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGUUC*GGUGAG*CU*AAUCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 8BHL|1|0|G|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8BHL_005 not in the Motif Atlas
- Homologous match to J4_5J7L_022
- Geometric discrepancy: 0.1419
- The information below is about J4_5J7L_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_69051.6
- Basepair signature
- cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8BHL|1|0|G|1310
8BHL|1|0|G|1311
8BHL|1|0|U|1312
8BHL|1|0|U|1313
8BHL|1|0|C|1314
*
8BHL|1|0|G|1338
8BHL|1|0|G|1339
8BHL|1|0|U|1340
8BHL|1|0|G|1341
8BHL|1|0|A|1342
8BHL|1|0|G|1343
*
8BHL|1|0|C|1404
8BHL|1|0|U|1405
*
8BHL|1|0|A|1597
8BHL|1|0|A|1598
8BHL|1|0|U|1599
8BHL|1|0|C|1600
8BHL|1|0|G|1601
8BHL|1|0|U|1602
8BHL|1|0|A|1603
8BHL|1|0|C|1604
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L23
- Chain c
- 50S ribosomal protein L34
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