J4_8BHN_009

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CUG*CGG*UCCUAAGGUAG*CGAAUG

Length

23 nucleotides

Bulged bases

8BHN|1|0|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|0|C|1833
8BHN|1|0|U|1834
8BHN|1|0|G|1835
*
8BHN|1|0|C|1905
8BHN|1|0|G|1906
8BHN|1|0|G|1907
*
8BHN|1|0|U|1923
8BHN|1|0|C|1924
8BHN|1|0|C|1925
8BHN|1|0|U|1926
8BHN|1|0|A|1927
8BHN|1|0|A|1928
8BHN|1|0|G|1929
8BHN|1|0|G|1930
8BHN|1|0|U|1931
8BHN|1|0|A|1932
8BHN|1|0|G|1933
*
8BHN|1|0|C|1967
8BHN|1|0|G|1968
8BHN|1|0|A|1969
8BHN|1|0|A|1970
8BHN|1|0|U|1971
8BHN|1|0|G|1972

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain 4

Transfer RNA; tRNA

Chain A

50S ribosomal protein L2