J4_8BHN_014

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CGUAAAGCG*CGAAAG*CCGUAAACGAUG*CCG

Length

30 nucleotides

Bulged bases

8BHN|1|2|A|572, 8BHN|1|2|C|576, 8BHN|1|2|A|815, 8BHN|1|2|C|817, 8BHN|1|2|A|819

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|2|C|569
8BHN|1|2|G|570
8BHN|1|2|U|571
8BHN|1|2|A|572
8BHN|1|2|A|573
8BHN|1|2|A|574
8BHN|1|2|G|575
8BHN|1|2|C|576
8BHN|1|2|G|577
*
8BHN|1|2|C|764
8BHN|1|2|G|765
8BHN|1|2|A|766
8BHN|1|2|A|767
8BHN|1|2|A|768
8BHN|1|2|G|769
*
8BHN|1|2|C|810
8BHN|1|2|C|811
8BHN|1|2|G|812
8BHN|1|2|U|813
8BHN|1|2|A|814
8BHN|1|2|A|815
8BHN|1|2|A|816
8BHN|1|2|C|817
8BHN|1|2|G|818
8BHN|1|2|A|819
8BHN|1|2|U|820
8BHN|1|2|G|821
*
8BHN|1|2|C|879
8BHN|1|2|C|880
8BHN|1|2|G|881

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain l

30S ribosomal protein S8

Chain p

30S ribosomal protein S12

Chain s

30S ribosomal protein S15

Chain u

30S ribosomal protein S17