J4_8BN3_009

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUAAG*UUG*CC*GUG

Length

13 nucleotides

Bulged bases

8BN3|1|1|A|2657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|1|C|2654
8BN3|1|1|U|2655
8BN3|1|1|A|2656
8BN3|1|1|A|2657
8BN3|1|1|G|2658
*
8BN3|1|1|U|2712
8BN3|1|1|U|2713
8BN3|1|1|G|2714
*
8BN3|1|1|C|2741
8BN3|1|1|C|2742
*
8BN3|1|1|G|2751
8BN3|1|1|U|2752
8BN3|1|1|G|2753

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain L5

RPL5 isoform 1

Chain N1

60S ribosomal protein L21-A

Chain Q2

60S ribosomal protein L42-A