J4_8BRM_004
3D structure
- PDB id
- 8BRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state, no E-site tRNA (A6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GGGUUC*GGUGAC*GG*CGCCGUACC
- Length
- 23 nucleotides
- Bulged bases
- 8BRM|1|Lt|G|1207
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BRM|1|Lt|G|1175
8BRM|1|Lt|G|1176
8BRM|1|Lt|G|1177
8BRM|1|Lt|U|1178
8BRM|1|Lt|U|1179
8BRM|1|Lt|C|1180
*
8BRM|1|Lt|G|1204
8BRM|1|Lt|G|1205
8BRM|1|Lt|U|1206
8BRM|1|Lt|G|1207
8BRM|1|Lt|A|1208
8BRM|1|Lt|C|1209
*
8BRM|1|Lt|G|1287
8BRM|1|Lt|G|1288
*
8BRM|1|Lt|C|1464
8BRM|1|Lt|G|1465
8BRM|1|Lt|C|1466
8BRM|1|Lt|C|1467
8BRM|1|Lt|G|1468
8BRM|1|Lt|U|1469
8BRM|1|Lt|A|1470
8BRM|1|Lt|C|1471
8BRM|1|Lt|C|1472
Current chains
- Chain Lt
- Large Subunit rRNA
Nearby chains
- Chain LD
- 5.8S rRNA
- Chain LG
- Ribosomal protein L39
- Chain LS
- Ribosomal protein L19
- Chain LY
- Ribosomal protein L23A
- Chain Lh
- Ribosomal protein L34
- Chain Li
- Ribosomal protein L29
- Chain Lk
- Ribosomal protein L37
- Chain Ll
- Ribosomal protein L38e
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