J4_8BTK_014

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

8BTK|1|B5|A|3980

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|C|3977
8BTK|1|B5|U|3978
8BTK|1|B5|A|3979
8BTK|1|B5|A|3980
8BTK|1|B5|G|3981
*
8BTK|1|B5|U|4035
8BTK|1|B5|U|4036
8BTK|1|B5|G|4037
*
8BTK|1|B5|C|4064
8BTK|1|B5|C|4065
*
8BTK|1|B5|G|4074
8BTK|1|B5|G|4075
8BTK|1|B5|G|4076

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BD

Ribosomal_L18_c domain-containing protein

Chain BT

60S ribosomal protein L21

Chain Bo

eL42