J4_8BUU_013

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

8BUU|1|a|C|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BUU|1|a|G|113
8BUU|1|a|A|114
8BUU|1|a|G|115
8BUU|1|a|U|116
8BUU|1|a|A|117
8BUU|1|a|A|118
8BUU|1|a|C|119
8BUU|1|a|A|120
8BUU|1|a|C|121
*
8BUU|1|a|G|246
8BUU|1|a|G|247
8BUU|1|a|C|248
*
8BUU|1|a|G|294
8BUU|1|a|U|295
8BUU|1|a|A|296
8BUU|1|a|G|297
*
8BUU|1|a|C|319
8BUU|1|a|C|320

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17