J4_8C8X_011

3D structure

PDB id

8C8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

GGGCUGC*GUGGAC*GGAAG*UGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8X|1|A|G|2643
8C8X|1|A|G|2644
8C8X|1|A|G|2645
8C8X|1|A|C|2646
8C8X|1|A|U|2647
8C8X|1|A|G|2648
8C8X|1|A|C|2649
*
8C8X|1|A|G|2671
8C8X|1|A|U|2672
8C8X|1|A|G|2673
8C8X|1|A|G|2674
8C8X|1|A|A|2675
8C8X|1|A|C|2676
*
8C8X|1|A|G|2731
8C8X|1|A|G|2732
8C8X|1|A|A|2733
8C8X|1|A|A|2734
8C8X|1|A|G|2735
*
8C8X|1|A|U|2769
8C8X|1|A|G|2770
8C8X|1|A|C|2771

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14