J4_8C8Y_009
3D structure
- PDB id
- 8C8Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CUGC*GCGG*UCCUAAGGUAG*CGAAUG
- Length
- 25 nucleotides
- Bulged bases
- 8C8Y|1|A|C|1925, 8C8Y|1|A|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8C8Y|1|A|C|1833
8C8Y|1|A|U|1834
8C8Y|1|A|G|1835
8C8Y|1|A|C|1836
*
8C8Y|1|A|G|1904
8C8Y|1|A|C|1905
8C8Y|1|A|G|1906
8C8Y|1|A|G|1907
*
8C8Y|1|A|U|1923
8C8Y|1|A|C|1924
8C8Y|1|A|C|1925
8C8Y|1|A|U|1926
8C8Y|1|A|A|1927
8C8Y|1|A|A|1928
8C8Y|1|A|G|1929
8C8Y|1|A|G|1930
8C8Y|1|A|U|1931
8C8Y|1|A|A|1932
8C8Y|1|A|G|1933
*
8C8Y|1|A|C|1967
8C8Y|1|A|G|1968
8C8Y|1|A|A|1969
8C8Y|1|A|A|1970
8C8Y|1|A|U|1971
8C8Y|1|A|G|1972
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: