J4_8C8Y_010
3D structure
- PDB id
- 8C8Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GC*GC*GUGAUCC*GCUCAAC
- Length
- 18 nucleotides
- Bulged bases
- 8C8Y|1|A|U|2390, 8C8Y|1|A|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8C8Y|1|A|G|2282
8C8Y|1|A|C|2283
*
8C8Y|1|A|G|2325
8C8Y|1|A|C|2326
*
8C8Y|1|A|G|2389
8C8Y|1|A|U|2390
8C8Y|1|A|G|2391
8C8Y|1|A|A|2392
8C8Y|1|A|U|2393
8C8Y|1|A|C|2394
8C8Y|1|A|C|2395
*
8C8Y|1|A|G|2421
8C8Y|1|A|C|2422
8C8Y|1|A|U|2423
8C8Y|1|A|C|2424
8C8Y|1|A|A|2425
8C8Y|1|A|A|2426
8C8Y|1|A|C|2427
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
Coloring options: